title: "Meta-analysis of genes"
  subtitle: "Draft, 25-05-2025v6c"
  output:
    html_document:
      toc: true
      toc_float:
        collapsed: false
        smooth_scroll: false
      code_folding: hide
      number_sections: false
      theme: spacelab
  ---
  # MA_HC_Excitadoras_FM {- .tabset .tabset-fade .tabset-pills}
  
  
  ```r
  library(dplyr)
  library(knitr)
  library(DT)
  load("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/MA_HC_Excitadoras_FM.RData")
  ```

ENSG00000089847

Statistics of ENSG00000089847 meta-analisys

kable(sig.genes.df['ENSG00000089847',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000089847 ANKRD24 -0.3928164 -0.3142151 -0.2356138 0 0.3535686 0.5521 0.0401034 0 0 1 0 0 11.34254 2 1 Study43 0.5024892 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000089847_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000089847_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000089847_INFLUENCE.png")

ENSG00000104435

Statistics of ENSG00000104435 meta-analisys

kable(sig.genes.df['ENSG00000104435',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000104435 STMN2 -1.293802 -1.0874 -0.8809981 0 0.3397306 0.5599848 0.1053091 0 0 1 0 0 21.01297 2 2 Study43 0.5045733 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000104435_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000104435_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000104435_INFLUENCE.png")

ENSG00000104722

Statistics of ENSG00000104722 meta-analisys

kable(sig.genes.df['ENSG00000104722',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000104722 NEFM -1.204537 -1.035692 -0.8668477 0 0.4473494 0.5035964 0.0861467 0 0 1 0 0 29.06845 2 2 Study43 0.5006595 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000104722_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000104722_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000104722_INFLUENCE.png")

ENSG00000105613

Statistics of ENSG00000105613 meta-analisys

kable(sig.genes.df['ENSG00000105613',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000105613 MAST1 -0.3283674 -0.2577812 -0.1871951 0 0.7411504 0.3892926 0.036014 0 0 1 0 0 9.250599 2 2 Study43 0.500874 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000105613_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000105613_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000105613_INFLUENCE.png")

ENSG00000128739

Statistics of ENSG00000128739 meta-analisys

kable(sig.genes.df['ENSG00000128739',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000128739 SNRPN -3.57849 -3.14989 -2.72129 0 0.6515698 0.419552 0.2186774 0 0 1 0 0 42.21225 2 2 Study43 0.5056251 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000128739_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000128739_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000128739_INFLUENCE.png")

ENSG00000133169

Statistics of ENSG00000133169 meta-analisys

kable(sig.genes.df['ENSG00000133169',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000133169 BEX1 -0.1879682 -0.1514166 -0.1148651 0 0.2058784 0.6500172 0.0186491 0 0 1 0 0 12.28238 2 1 Study43 0.5000983 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000133169_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000133169_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000133169_INFLUENCE.png")

ENSG00000139767

Statistics of ENSG00000139767 meta-analisys

kable(sig.genes.df['ENSG00000139767',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000139767 SRRM4 -3.174943 -2.485415 -1.795886 0 0.4402946 0.5069803 0.3518069 0 0 1 0 0 8.993561 2 2 Study43 0.5612952 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000139767_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000139767_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000139767_INFLUENCE.png")

ENSG00000141668

Statistics of ENSG00000141668 meta-analisys

kable(sig.genes.df['ENSG00000141668',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000141668 CBLN2 -3.518629 -3.074971 -2.631313 0 0.269432 0.6037131 0.2263601 0 0 1 0 0 37.68135 2 2 Study43 0.5061244 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000141668_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000141668_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000141668_INFLUENCE.png")

ENSG00000152954

Statistics of ENSG00000152954 meta-analisys

kable(sig.genes.df['ENSG00000152954',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000152954 NRSN1 -0.1789719 -0.1408863 -0.1028007 0 0.74308 0.388676 0.0194318 0 0 1 0 0 9.510717 2 2 Study43 0.5001041 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000152954_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000152954_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000152954_INFLUENCE.png")

ENSG00000162374

Statistics of ENSG00000162374 meta-analisys

kable(sig.genes.df['ENSG00000162374',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000162374 ELAVL4 -1.637989 -1.383444 -1.1289 0 0.1351231 0.7131783 0.1298722 0 0 1 0 0 22.4469 2 2 Study43 0.5076322 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000162374_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000162374_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000162374_INFLUENCE.png")

ENSG00000162706

Statistics of ENSG00000162706 meta-analisys

kable(sig.genes.df['ENSG00000162706',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000162706 CADM3 -0.3014356 -0.2366081 -0.1717805 0 0.0059224 0.9386579 0.0330759 0 0 1 0 0 9.250599 2 2 Study43 0.5001074 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000162706_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000162706_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000162706_INFLUENCE.png")

ENSG00000164100

Statistics of ENSG00000164100 meta-analisys

kable(sig.genes.df['ENSG00000164100',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000164100 NDST3 -3.167455 -2.774794 -2.382134 0 0.0860804 0.7692205 0.2003407 0 0 1 0 0 39.09799 2 2 Study43 0.5065249 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000164100_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000164100_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000164100_INFLUENCE.png")

ENSG00000164741

Statistics of ENSG00000164741 meta-analisys

kable(sig.genes.df['ENSG00000164741',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000164741 DLC1 -0.3889202 -0.3078746 -0.2268291 0 1.966938 0.3740115 0.0413505 0 0 1 0 0 10.11841 3 2 Study43,syn52293442_hc 0.3130033 Study43,syn52293442_hc

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000164741_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000164741_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000164741_INFLUENCE.png")

ENSG00000165023

Statistics of ENSG00000165023 meta-analisys

kable(sig.genes.df['ENSG00000165023',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000165023 DIRAS2 -0.4395447 -0.3489177 -0.2582907 0 0.336413 0.5619071 0.0462391 0 0 1 0 0 10.42304 2 2 Study43 0.5001533 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000165023_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000165023_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000165023_INFLUENCE.png")

ENSG00000168830

Statistics of ENSG00000168830 meta-analisys

kable(sig.genes.df['ENSG00000168830',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000168830 HTR1E -1.250418 -1.022763 -0.7951083 0 0.0682019 0.793973 0.1161525 0 0 1 0 0 14.73803 2 2 Study43 0.5024095 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000168830_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000168830_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000168830_INFLUENCE.png")

ENSG00000171246

Statistics of ENSG00000171246 meta-analisys

kable(sig.genes.df['ENSG00000171246',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000171246 NPTX1 -0.3835181 -0.3097433 -0.2359684 0 0.3203107 0.571421 0.0376409 0 0 1 0 0 12.62289 2 1 Study43 0.500895 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000171246_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000171246_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000171246_INFLUENCE.png")

ENSG00000177511

Statistics of ENSG00000177511 meta-analisys

kable(sig.genes.df['ENSG00000177511',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000177511 ST8SIA3 -0.6180394 -0.5085671 -0.3990948 0 0.0920814 0.7615476 0.0558542 0 0 1 0 0 15.86749 2 2 Study43 0.5011558 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000177511_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000177511_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000177511_INFLUENCE.png")

ENSG00000182348

Statistics of ENSG00000182348 meta-analisys

kable(sig.genes.df['ENSG00000182348',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000182348 ZNF804B -0.6257177 -0.4985491 -0.3713804 0 0.428643 0.5126556 0.0648832 0 0 1 0 0 10.85658 2 2 Study43 0.5014466 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000182348_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000182348_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000182348_INFLUENCE.png")

ENSG00000182870

Statistics of ENSG00000182870 meta-analisys

kable(sig.genes.df['ENSG00000182870',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000182870 GALNT9 -0.3719519 -0.2995739 -0.2271958 0 0.067849 0.7944948 0.0369283 0 0 1 0 0 12.28238 2 1 Study43 0.5001494 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000182870_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000182870_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000182870_INFLUENCE.png")

ENSG00000184349

Statistics of ENSG00000184349 meta-analisys

kable(sig.genes.df['ENSG00000184349',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000184349 EFNA5 -1.421789 -1.218614 -1.015438 0 1.348619 0.5095081 0.1036628 0 0 1 0 0 27.77784 3 3 Study43 0.4678705 all.p.values < 0.05

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000184349_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000184349_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/FM/plots/ENSG00000184349_INFLUENCE.png")

sessionInfo

date()
## [1] "Sun May 25 16:09:20 2025"
sessionInfo()
## R version 4.2.2 (2022-10-31)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: CentOS Linux 7 (Core)
## 
## Matrix products: default
## BLAS/LAPACK: /opt/sci-soft/software/FlexiBLAS/3.0.4-GCC-11.2.0/lib64/libflexiblas.so.3.0
## 
## locale:
##  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C               LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
##  [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8    LC_PAPER=en_US.UTF-8       LC_NAME=C                 
##  [9] LC_ADDRESS=C               LC_TELEPHONE=C             LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       
## 
## attached base packages:
## [1] stats     graphics  grDevices utils     datasets  methods   base     
## 
## other attached packages:
##  [1] plotly_4.10.4       DT_0.26             knitr_1.41          ggplot2_3.5.2       dplyr_1.0.10        limma_3.54.0       
##  [7] tibble_3.1.8        metafor_3.8-1       metadat_1.2-0       Matrix_1.5-3        Biobase_2.58.0      BiocGenerics_0.44.0
## 
## loaded via a namespace (and not attached):
##  [1] tidyselect_1.2.0   xfun_0.35          bslib_0.4.2        purrr_0.3.5        lattice_0.20-45    vctrs_0.6.5       
##  [7] generics_0.1.3     htmltools_0.5.4    viridisLite_0.4.1  yaml_2.3.6         utf8_1.2.2         rlang_1.1.6       
## [13] pillar_1.8.1       jquerylib_0.1.4    glue_1.6.2         withr_2.5.0        DBI_1.1.3          RColorBrewer_1.1-3
## [19] lifecycle_1.0.3    stringr_1.5.0      gtable_0.3.1       htmlwidgets_1.6.0  evaluate_0.19      labeling_0.4.2    
## [25] fastmap_1.1.0      crosstalk_1.2.0    fansi_1.0.3        highr_0.9          scales_1.4.0       cachem_1.0.6      
## [31] jsonlite_1.8.4     farver_2.1.1       png_0.1-8          digest_0.6.31      stringi_1.7.8      grid_4.2.2        
## [37] mathjaxr_1.6-0     cli_3.4.1          tools_4.2.2        magrittr_2.0.3     sass_0.4.4         lazyeval_0.2.2    
## [43] dichromat_2.0-0.1  tidyr_1.2.1        pkgconfig_2.0.3    ellipsis_0.3.2     data.table_1.14.6  assertthat_0.2.1  
## [49] rmarkdown_2.19     httr_1.4.4         rstudioapi_0.14    R6_2.5.1           nlme_3.1-161       compiler_4.2.2